Evidence code | Data set description |
AT-CX | mRNA co-expression between Arabidopsis genes |
AT-DC | Domain co-occurrence between Arabidopsis proteins |
AT-GN | Gene neighborhoods between Arabidopsis orthologs in bacterial genomes |
AT-LC | Literature-curated Arabidopsis protein interactions |
AT-PG | Phylogenetic profile similarity between Arabidopsis homologs |
CE-CC | Association between Arabidopsis orthologs inferred from co-citation of C. elegans genes in Medline abstracts |
CE-CX | Association between Arabidopsis orthologs inferred from mRNA co-expression in C. elegans |
CE-GT | Association between Arabidopsis orthologs inferred from genetic interactions in C. elegans |
CE-LC | Association between Arabidopsis orthologs inferred from literature-curated C. elegans protein interactions |
CE-YH | Association between Arabidopsis orthologs inferred from C. elegans protein interactions by high-throughput yeast-2-hybrid analysis |
DM-PI | Association between Arabidopsis orthologs inferred from D. melanogaster protein interactions |
HS-CX | Association between Arabidopsis orthologs inferred from mRNA co-expression in Human |
HS-DC | Association between Arabidopsis orthologs inferred from domain co-occurrence between Human proteins |
HS-LC | Association between Arabidopsis orthologs inferred from literature-curated human protein interactions |
HS-MS | Association between Arabidopsis orthologs inferred from human protein interactions by affinity purification/mass spectrometry analysis |
HS-YH | Association between Arabidopsis orthologs inferred from human protein interactions by high-throughput yeast-2-hybrid analysis |
SC-CC | Association between Arabidopsis orthologs inferred from co-citation of S. cerevisiae genes in Medline abstracts |
SC-CX | Association between Arabidopsis orthologs inferred from mRNA co-expression in S. cerevisiae |
SC-DC | Association between Arabidopsis orthologs inferred from domain co-occurrence between S. cerevisiae proteins |
SC-GT | Association between Arabidopsis orthologs inferred from genetic interactions in S. cerevisia |
SC-LC | Association between Arabidopsis orthologs inferred from literature-curated S. cerevisiae protein interactions |
SC-MS | Association between Arabidopsis orthologs inferred from S. cerevisiae protein interactions by affinity purification/mass spectrometry analysis |
SC-TS | Association between Arabidopsis orthologs inferred from S. cerevisiae protein interactions which were also inferred from protein tertiary structures |
SC-YH | Association between Arabidopsis orthologs inferred from S. cerevisiae protein interactions by high-throughput yeast-2-hybrid analysis |